Let bots set a picture from a file they can see

A coordinator asked to set an uploaded logo as a workspace picture could
not: the picture tools take a media id, and nothing ever gave the bot one.
Attachments reached the model as "[Attached image \"logo.png\"]", every
file tool answers with a [file:ID] ref, and an SVG is deliberately stored
as a document rather than an image.

- copyMediaAsPicture copies an approved image into a new picture row
  (bot-image/workspace-image). The source keeps its row and bytes, so a
  message that attached it still loads and changing a picture can never
  take a file away from a conversation.
- grabPictureSource resolves a picture by [file:ID] (the same scope gate
  every file tool uses) or by the user's own upload; parseFileRef reads
  the [file:12] form.
- The new set_picture tool ships on every run: a bot sets its own face,
  the coordinator can also dress a worker. update_workspace gained
  picture_file_id, and setBotPicture/setProfileImage share the copy and
  the delete.
- removeReplacedPicture deletes a replaced picture only when it really is
  one, never a chat upload.
- uploadAndRecordMedia writes images in their own format: PNG stays PNG
  with its transparency, WebP stays WebP, GIF becomes PNG, everything
  else JPEG, and the row records the real mime type (it used to say jpeg
  for every image).
- Pictures change live: BotUpdatedData carries image_media_id and a new
  server:workspace-updated pushes workspace pictures, relayed between
  processes.
- Attachments are labelled with their media id, and BotFilesNote tells a
  bot that a [file:ID] can become a picture.
- grabRunScopes is now the single source of a run's reachable folders,
  shared by the file tools, imports and the picture tools.

src/bots-queue/run-bot-reply.ts

@@ -17,6 +17,7 @@ import grabBotComputers from "@/src/functions/backend/db/computers/grab-bot-comp
 import runTextLoop from "@/src/harness/text/run-text-loop";
 import grabBotChatTools from "@/src/harness/tools/bot/grab-bot-chat-tools";
 import grabBotFileTools from "@/src/harness/tools/storage/grab-bot-file-tools";
+import grabRunScopes from "@/src/functions/backend/db/bot-files/grab-run-scopes";
 import openBotExtensions from "@/src/harness/tools/extensions/open-bot-extensions";
 import openBotSkills from "@/src/harness/tools/skills/open-bot-skills";
 import botMessagesToHarness from "./bot-messages-to-harness";
@@ -87,11 +88,18 @@ export default async function runBotReply({
      */
     const attachments: number[] = [];
 
+    /**
+     * The files this run reaches: its file tools and the pictures it may
+     * set work from the same answer (`grabRunScopes`).
+     */
+    const scopes = await grabRunScopes({ bot, user_id, workspace_id });
+
     const file_tools = await grabBotFileTools({
         bot,
         user_id,
         workspace_id,
         session_id,
+        scopes,
         onAttach: ({ media_id }) => attachments.push(media_id),
     });
 
@@ -101,6 +109,7 @@ export default async function runBotReply({
         computers,
         session_id,
         workspace_id,
+        scopes,
         message_id: job.message_id || undefined,
         onTakeOver: ({ ref }) => take_overs.push(ref),
     });